CDS

Accession Number TCMCG006C86508
gbkey CDS
Protein Id XP_013685549.2
Location complement(join(70088081..70088176,70088301..70088369,70088455..70088521,70088650..70088717,70088847..70088957,70089035..70089092,70089172..70089208,70089304..70089397,70089531..70089596,70089683..70089747,70089851..70089995,70090064..70090129,70090319..70090468,70090698..70090767,70090856..70090932,70091032..70091100,70091296..70091379,70091524..70091561,70091647..70091790,70091860..70092058,70092149..70092277,70093496..70093579,70093671..70093784,70093862..70093969,70094047..70094154,70094156..70094179,70094273..70094356,70094473..70094590,70094698..70094753,70094950..70095135,70095220..70095470,70095551..70095701,70095780..70095896,70095979..70096086,70096164..70096257,70096331..70096392,70096507..70096554))
Gene LOC106389752
GeneID 106389752
Organism Brassica napus

Protein

Length 1204aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013830095.2
Definition LOW QUALITY PROTEIN: Niemann-Pick C1 protein-like [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category I
Description Niemann-Pick C1 N terminus
KEGG_TC 2.A.6.6
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko02000        [VIEW IN KEGG]
KEGG_ko ko:K12385        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04142        [VIEW IN KEGG]
ko04979        [VIEW IN KEGG]
map04142        [VIEW IN KEGG]
map04979        [VIEW IN KEGG]
GOs GO:0000323        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005496        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005576        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005635        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005764        [VIEW IN EMBL-EBI]
GO:0005773        [VIEW IN EMBL-EBI]
GO:0005783        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0005887        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006486        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006869        [VIEW IN EMBL-EBI]
GO:0007034        [VIEW IN EMBL-EBI]
GO:0007041        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008202        [VIEW IN EMBL-EBI]
GO:0008206        [VIEW IN EMBL-EBI]
GO:0008289        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009100        [VIEW IN EMBL-EBI]
GO:0009101        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010876        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015485        [VIEW IN EMBL-EBI]
GO:0015850        [VIEW IN EMBL-EBI]
GO:0015918        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016021        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0030301        [VIEW IN EMBL-EBI]
GO:0031224        [VIEW IN EMBL-EBI]
GO:0031226        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0032787        [VIEW IN EMBL-EBI]
GO:0032934        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0036094        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042592        [VIEW IN EMBL-EBI]
GO:0042632        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043178        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043413        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044459        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048471        [VIEW IN EMBL-EBI]
GO:0048878        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0055088        [VIEW IN EMBL-EBI]
GO:0055092        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070085        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901135        [VIEW IN EMBL-EBI]
GO:1901137        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901615        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGATCCCTCGCAAGCCGCTGCTTACGTCTCTTCTCCTTTTACAGGTGATGATCAGTTTCTCAGTTTTAGTCAGCGCAGAGCTCATCTCCTCACTCAACTCTCCAATACATTCAAATGATTACTGCGCTATGTATGACATTTGTGGACAACGCACCGACGGCAAAGTCCTCAACTGTCCTTACGGTTCCCCTTCCGTTAAGCCTGATGATCTCTTTTCCGCCAAAATACAAAGTCTCTGTCCAACCATTACTGGGAGTGTCTGCTGTACGGAGACTCAGTTTGACACCTTGAGGTCTCAAGTTCAACAGGCTGTCCCTTTTCTTGTGGGTTGTCCTGCCTGCTTGAGGAACTTCTTGAACCTCTTCTGCGAGCTCTCCTGCTCTCCCAATCAGTCCCTTTTCATCAATGTCACTTCTGTTGCTGAGGTTGGTGGAAATTTGACTGTGGATGGTATAGACTATCACATTACTGACATGTTTGGAGAAGGCCTTTACGAGTCTTGTAAAGAGGTGAAATTTGGAACTATGAACACACGTGCCATCAATTTCGTGGGTGGTGGCGCTCAAAACTTCGGAGAGTGGTTTGCGTTTATCGGTCAGAAAGCACCACCTGGCTTCCCTGGTTCACCATATGCAATCAATTTCAAATCGAGTTCCCCTGAGTTATCTGCAATGGCGCCGATGAACTTATCTACTTATTCGTGTGGCGACACATCACTTGGATGCTCTTGTGGTGACTGCCCTTCCTCACCCGCTTGCTCTAGTCCCGAACCCCTTCCTCCCCCACATGAAGAAGACTCCTGCTCATTTCGAATCGGTCCTCTTAAGGTTAGATGCATTGAGTTATCGATGGCACTGTTATACATCCTGCTGGTCTCTAGCTTCTTTGGATGGGCTACTTTCAGTCGAACAAGGGATATAACACAGCCTGATGGTAGCTCAGAGTCACTAGTGCGTCTGCTGGAAGGAGATGGAATTAATAGTGAACTGAAGGAAAGCACACTTGGTGTCAAGGTGAAAAGACATGCTCACCTCTCTCCCGTTCAGAGATACATGGCATCATTTTACAAATCATACGGGTCATGGATTGCTAGAAATCCATCTCTTGTTCTTTTCATTTCGGTGGCTATAGTTCTTGCGCTCAGTTCAGGCCTCTTTCGTTTTAAGGTGGAAACGCGGCCAGAAAAGCTGTGGGTAGGTCCTTCAAGCAAAGCAGCAGAAGAGAAAAAGTTCTTTGATAGCCACCTTTCACCATTCTACAGAATCGAGCAGCTTATCTTGGCCACTGTTCCGTCTTTCAACTTCCAGCATTACACGTCATCAGAGCTGTGCTTAAGCGCTTTTCAGGCGCCCGTTGATCCTAGTGCAGTGTTGGGAGGATTTTCAGGGAGTAACTATTCTGAGGCTACTGCGTTTGTTATAACATATCCAGTTAACAATATCGTTGGTGATTCGAGCAACGAGAACGCAAGGGCAATAGCATGGGAAAAATCGTTCATTCAATTAGCGAAGAAGGAGCTGCTATCTATGGTGCAATCCAATAATTTGACTCTCTCTTTTTCATCCGAAAGTTCAATAGAGGAAGAGCTGAAAAGAGAAAGCACTGCTGATGTTATAACAATAGCTGCAAGCTATCTGGTTATGTTTGTTTATATTTCCGTCACGCTTGGAGATGCTCCGCAGTTTTATACTTTCTTCATTTCATCAAAGGTCTTGCTCGGTCTTTCGGGTGTTGTGCTTGTCTTGCTTTCTGTACTTGGATCTATTGGATTTTTCAGTGCGGTTGGAGTTAAATCCACATTGATCATAATGGAAGTCATTCCTTTCCTAGTCCTGGCTGTGGGAGTAGATAATATGTGCATATTGGTTCGTGCTGTAAAGAGACAGCCTCGTGATATTTCTTTAGAGGACCGGATCAGCTCTGCACTTGTTGAAGTAGGTCCATCCATAACGCTGGCAAGTTTATCCGAAGTATTGGCATTTGCTGTTGGAGCTTTTGTTCCAATGCCAGCATGTCGTATCTTTTCGATGTTTGCAGCTTTGGCTATTCTGTTGGACTTCTTTCTGCAAATCACAGCATTTGTTGCGCTAATAGTTTTTGACTGCAAAAGAGCTGCAGATAACAGAATTGATTGCTTCCCTTGCGTAAAAGTTTCTTCCTCGTCTCAAGAATCTGTTGAAGGTGGAAGTGAACCTGGGTTTCTTGAGAGATACATGAAGGAGGTTCATGCACCCGTGCTTGGACTTTGGGTTGTAAAAATGGTTGTTGTTGCTGTATTCTTGGCTTTTGCGCTGGCAAGCATTGCCCTAAGTCCAAGGCTGGAAACTGGTTTGGAGCAGAAAATTGTTCTTCCTAGGGACTCTTACCTTCAAGACTATTTCGACAGTCTCGCAGAGTACCTCATAGTGGGACCGCCTTTGTATTTTGTAGTCAAGGATTACAATTATAGCTTGGAATCAAGGCATACGAATCAGTTGTGCTCTATCAGCCAGTGCAATTCGAATTCCCTTTTAAATGAGATATCAAGAGCGTCACAAACTCCAGAAACAAGTTACATTGCCAAACCAGCTGCGTCTTGGCTCGATGATTTTCTTGTATGGCTATCACCAGAGGCTTTTGGCTGTTGTCGGAAGTTCACTAATGGCAGTTATTGTCCTCCAGACGACCAGCCACCTTGCTGCACAGCTGATGATGATATATGCAGTTTAGATGGGATCTGTAGAGACTGTACCACATGCTTTCGACACTCAGATTTGGTTCGGGATCGCCCATCTACAGCTCAGTTCAGGGAGAAACTACCCTGGTTTCTAAATGCTTTGCCTTCGGCTGACTGTGCAAAAGGTGGTCATGGAGCTTATACGAATAGCGTGGATTTGAAAGGGTATGAGACTGGTGTTATACAGGCATCTGAGTTCCGTACATACCACACACCACTTAACACACAAGGTGACTATGTTAATTCACTGCGAGCTGCTCGGGAGTTCAGTTCAAGAATGTCTAATTTGCTGAAGATTGAGATCTTTCCATATTCTGTGTTCTACATTTTCTTTGAGCAATATCTGAATATCTGGACCGTAGCTTTGACAAACCTCGCTATAGCAATCGGTGCTATATTTGTTGTTTGCTTATTAATCACTTCCAGTGCCTGGAGTTCAGCCATCATTGTTCTTGTGTTAGTGATGATACTCGCAGACCTCATGGGTGTAATGGTGGTTTTGGGAATTCAACTCAATGCGGTTTCTGTTGTGAATTTGATAATGTCAATCGGGATTGCTGTAGAATTCTGCGTGCACATATCACATGCCTTCCTGATGAGTAATGGGAACAGAGAACAAAGAGCGAGGAAGGCACTGGAAACCATGGGAGCTTCGGTTTTCAGTGGGATCACACTCACCAAACTTGTTGGAGTGATGGTGCTTTGCTTCGCACGATCGGAGATATTTGTGGTGTATTACTTTCAAATGTACTTGGCTTTGGTTATAATCGGCTTCCTGCATGGGCTCGTTTTCTTACCTGTCATACTTAGTTTAGCCGGGCCTCCACAGATATACTTGGACACCGAGGAGGAGGAGCAGGGGAGAGACGGAGCTTCTTCTTCCCTATTGAACTGA
Protein:  
MAIPRKPLLTSLLLLQVMISFSVLVSAELISSLNSPIHSNDYCAMYDICGQRTDGKVLNCPYGSPSVKPDDLFSAKIQSLCPTITGSVCCTETQFDTLRSQVQQAVPFLVGCPACLRNFLNLFCELSCSPNQSLFINVTSVAEVGGNLTVDGIDYHITDMFGEGLYESCKEVKFGTMNTRAINFVGGGAQNFGEWFAFIGQKAPPGFPGSPYAINFKSSSPELSAMAPMNLSTYSCGDTSLGCSCGDCPSSPACSSPEPLPPPHEEDSCSFRIGPLKVRCIELSMALLYILLVSSFFGWATFSRTRDITQPDGSSESLVRLLEGDGINSELKESTLGVKVKRHAHLSPVQRYMASFYKSYGSWIARNPSLVLFISVAIVLALSSGLFRFKVETRPEKLWVGPSSKAAEEKKFFDSHLSPFYRIEQLILATVPSFNFQHYTSSELCLSAFQAPVDPSAVLGGFSGSNYSEATAFVITYPVNNIVGDSSNENARAIAWEKSFIQLAKKELLSMVQSNNLTLSFSSESSIEEELKRESTADVITIAASYLVMFVYISVTLGDAPQFYTFFISSKVLLGLSGVVLVLLSVLGSIGFFSAVGVKSTLIIMEVIPFLVLAVGVDNMCILVRAVKRQPRDISLEDRISSALVEVGPSITLASLSEVLAFAVGAFVPMPACRIFSMFAALAILLDFFLQITAFVALIVFDCKRAADNRIDCFPCVKVSSSSQESVEGGSEPGFLERYMKEVHAPVLGLWVVKMVVVAVFLAFALASIALSPRLETGLEQKIVLPRDSYLQDYFDSLAEYLIVGPPLYFVVKDYNYSLESRHTNQLCSISQCNSNSLLNEISRASQTPETSYIAKPAASWLDDFLVWLSPEAFGCCRKFTNGSYCPPDDQPPCCTADDDICSLDGICRDCTTCFRHSDLVRDRPSTAQFREKLPWFLNALPSADCAKGGHGAYTNSVDLKGYETGVIQASEFRTYHTPLNTQGDYVNSLRAAREFSSRMSNLLKIEIFPYSVFYIFFEQYLNIWTVALTNLAIAIGAIFVVCLLITSSAWSSAIIVLVLVMILADLMGVMVVLGIQLNAVSVVNLIMSIGIAVEFCVHISHAFLMSNGNREQRARKALETMGASVFSGITLTKLVGVMVLCFARSEIFVVYYFQMYLALVIIGFLHGLVFLPVILSLAGPPQIYLDTEEEEQGRDGASSSLLN